PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62872.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 438aa    MW: 46525.1 Da    PI: 9.2722
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62872.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.9e-10189236147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47 
                      r +W+teEd +l  av+ +G ++W+ I ++   + R++ ++ +rw ++
       EPS62872.1 189 RRNWSTEEDAKLTAAVQAHGERNWSHIVKEEFiNDRSPSELSHRWASL 236
                      679************************9986667***********776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.04E-11184240IPR009057Homeodomain-like
PROSITE profilePS5129413.804184241IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-13186240IPR009057Homeodomain-like
SMARTSM007178.1E-10188239IPR001005SANT/Myb domain
CDDcd001679.77E-10191237No hitNo description
PfamPF139213.6E-8192239No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MGDKSKARKK GSIGEDVAAA LLRRLYSANT VLALLREISE VAAEKIDWHE LVKNTATGIT  60
SARECQILWR YMAYGETLIE PPGDDSRLAD DDSDTEFEME ASPTPGREAS FEASAYVKVL  120
MTSGHSNDAE VPNNSTIEAP LFINTPNSHG ASFIIPVTLQ KQSVPSGTQG GKRPSNGVPE  180
GDLHLRRKRR NWSTEEDAKL TAAVQAHGER NWSHIVKEEF INDRSPSELS HRWASLKRKQ  240
GDSKAGNSSQ TPEMQLAATN RAMSLALNMP MGEILKVAGQ TNTGNNLSAL FIYSACSWLV  300
SAPQANQQLG KPAAPPKPQP SNAKLPVNNP AATPDSMVKA AAVAAGARIA TLSDASSFME  360
ATRSQNVVHI SSSATGAEGS ATVKKPSGAS IAAGQLPSNV HFIRNGLAKA PIASYSSPAS  420
KPSSTSNPSD AHLPRARS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082058.11e-140PREDICTED: uncharacterized protein LOC105164926
TrEMBLS8DSW50.0S8DSW5_9LAMI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.15e-51MYB_related family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]